ABT1 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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[Homology]

Score

ABT1

Activator of basal transcription 1. (187 aa)

Predicted Functional Partners:

RRP36

0.991

KRR1

0.971

BYSL

0.966

NGDN

0.965

ENSCAPP00000001305

0.963

NOP14

0.963

DDX49

0.962

ENSCAPP00000018577

0.956

UTP25

0.952

UTP6

0.946

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABT1	BYSL	ENSCAPP00000001107	ENSCAPP00000015993	Activator of basal transcription 1.	Bystin like.	0.966
ABT1	DDX49	ENSCAPP00000001107	ENSCAPP00000011119	Activator of basal transcription 1.	DEAD-box helicase 49.	0.962
ABT1	ENSCAPP00000001305	ENSCAPP00000001107	ENSCAPP00000001305	Activator of basal transcription 1.	annotation not available	0.963
ABT1	ENSCAPP00000018577	ENSCAPP00000001107	ENSCAPP00000018577	Activator of basal transcription 1.	annotation not available	0.956
ABT1	KRR1	ENSCAPP00000001107	ENSCAPP00000005454	Activator of basal transcription 1.	KRR1 small subunit processome component homolog.	0.971
ABT1	NGDN	ENSCAPP00000001107	ENSCAPP00000014350	Activator of basal transcription 1.	Neuroguidin.	0.965
ABT1	NOP14	ENSCAPP00000001107	ENSCAPP00000006315	Activator of basal transcription 1.	NOP14 nucleolar protein.	0.963
ABT1	RRP36	ENSCAPP00000001107	ENSCAPP00000009546	Activator of basal transcription 1.	Ribosomal RNA processing 36.	0.991
ABT1	UTP25	ENSCAPP00000001107	ENSCAPP00000010159	Activator of basal transcription 1.	UTP25 small subunit processor component.	0.952
ABT1	UTP6	ENSCAPP00000001107	ENSCAPP00000018118	Activator of basal transcription 1.	UTP6 small subunit processome component.	0.946
BYSL	ABT1	ENSCAPP00000015993	ENSCAPP00000001107	Bystin like.	Activator of basal transcription 1.	0.966
BYSL	DDX49	ENSCAPP00000015993	ENSCAPP00000011119	Bystin like.	DEAD-box helicase 49.	0.990
BYSL	ENSCAPP00000001305	ENSCAPP00000015993	ENSCAPP00000001305	Bystin like.	annotation not available	0.990
BYSL	ENSCAPP00000018577	ENSCAPP00000015993	ENSCAPP00000018577	Bystin like.	annotation not available	0.997
BYSL	KRR1	ENSCAPP00000015993	ENSCAPP00000005454	Bystin like.	KRR1 small subunit processome component homolog.	0.998
BYSL	NGDN	ENSCAPP00000015993	ENSCAPP00000014350	Bystin like.	Neuroguidin.	0.990
BYSL	NOP14	ENSCAPP00000015993	ENSCAPP00000006315	Bystin like.	NOP14 nucleolar protein.	0.999
BYSL	RRP36	ENSCAPP00000015993	ENSCAPP00000009546	Bystin like.	Ribosomal RNA processing 36.	0.983
BYSL	UTP25	ENSCAPP00000015993	ENSCAPP00000010159	Bystin like.	UTP25 small subunit processor component.	0.962
BYSL	UTP6	ENSCAPP00000015993	ENSCAPP00000018118	Bystin like.	UTP6 small subunit processome component.	0.996