Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001109annotation not available (418 aa)    
Predicted Functional Partners:
ENSCAPP00000007314
annotation not available
 
 
  0.975
KCNAB1
Potassium voltage-gated channel subfamily A member regulatory beta subunit 1.
    
 0.897
KCNAB2
Potassium voltage-gated channel subfamily A regulatory beta subunit 2.
    
 0.758
KCNAB3
Potassium voltage-gated channel subfamily A regulatory beta subunit 3.
    
 0.746
ENSCAPP00000010642
annotation not available
    
  0.713
AKR7L
Aldo-keto reductase family 7 like (gene/pseudogene).
    
  0.633
ENSCAPP00000007425
annotation not available
    
  0.633
CAMK2B
Calcium/calmodulin dependent protein kinase II beta.
    
 
 0.588
CAMK2A
Calcium/calmodulin dependent protein kinase II alpha.
    
 
 0.588
ENSCAPP00000009598
annotation not available
    
 
 0.588
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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