STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001112annotation not available (162 aa)    
Predicted Functional Partners:
ENSCAPP00000006020
annotation not available
     
0.862
ADAMTS5
ADAM metallopeptidase with thrombospondin type 1 motif 5.
     
 0.855
ENSCAPP00000015593
annotation not available
    
0.838
TNC
Tenascin C.
   
 0.799
TNR
Tenascin R.
   
 0.797
ADAMTS4
ADAM metallopeptidase with thrombospondin type 1 motif 4.
     
 0.795
HLA-DOA
Major histocompatibility complex, class II, DO alpha.
    
  0.782
TNN
Tenascin N.
    
  0.773
ENSCAPP00000017938
annotation not available
    
  0.765
FCGRT
Fc fragment of IgG receptor and transporter.
    
  0.760
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.