STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001115annotation not available (159 aa)    
Predicted Functional Partners:
ENSCAPP00000004047
annotation not available
   
 0.878
SYK
Spleen associated tyrosine kinase.
    
 0.794
TNC
Tenascin C.
    
  0.692
TNR
Tenascin R.
    
  0.692
TNN
Tenascin N.
    
  0.692
FCER1G
Fc fragment of IgE receptor Ig.
   
 0.675
ZAP70
Zeta chain of T cell receptor associated protein kinase 70.
    
 0.669
ENSCAPP00000001061
annotation not available
    
 0.628
LRRC49
Leucine rich repeat containing 49.
    
 
 0.627
ENSCAPP00000003581
annotation not available
    
  0.600
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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