STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001115annotation not available (159 aa)    
Predicted Functional Partners:
ENSCAPP00000004047
annotation not available
   
 0.869
FCER1G
Fc fragment of IgE receptor Ig.
   
 0.681
TNC
Tenascin C.
    
  0.660
TNR
Tenascin R.
    
  0.660
TNN
Tenascin N.
    
  0.660
SYK
Spleen associated tyrosine kinase.
    
 0.623
HAPLN1
Hyaluronan and proteoglycan link protein 1.
    
 0.572
HABP2
Hyaluronan binding protein 2.
   
 0.565
ENSCAPP00000005147
annotation not available
   
 0.561
HGFAC
HGF activator.
   
 0.561
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.