STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001116annotation not available (293 aa)    
Predicted Functional Partners:
ALG8
ALG8 alpha-1,3-glucosyltransferase.
   
 0.997
ALG5
ALG5 dolichyl-phosphate beta-glucosyltransferase.
   
 0.995
ALG3
ALG3 alpha-1,3- mannosyltransferase.
   
 0.987
ENSCAPP00000011906
annotation not available
     
 0.961
DPM1
Dolichyl-phosphate mannosyltransferase subunit 1, catalytic.
   
 0.902
ALG12
ALG12 alpha-1,6-mannosyltransferase.
    
 
 0.887
ENSCAPP00000008878
annotation not available
   
 
  0.876
RPN1
Ribophorin I.
   
 
 0.853
TUSC3
Tumor suppressor candidate 3.
   
 
 0.829
UGGT2
UDP-glucose glycoprotein glucosyltransferase 2.
    
 
 0.819
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.