Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GABBR2Gamma-aminobutyric acid type B receptor subunit 2. (840 aa)    
Predicted Functional Partners:
GABBR1
Gamma-aminobutyric acid type B receptor subunit 1.
   
 0.999
GABRB3
Gamma-aminobutyric acid type A receptor beta3 subunit.
   
 
 0.966
GABRD
Gamma-aminobutyric acid type A receptor delta subunit.
   
 
 0.964
GABRG2
Gamma-aminobutyric acid type A receptor gamma2 subunit.
   
 0.959
GABRB2
Gamma-aminobutyric acid type A receptor beta2 subunit.
   
 
 0.959
GABRA1
Gamma-aminobutyric acid type A receptor alpha1 subunit.
   
 0.956
ENSCAPP00000017223
annotation not available
   
 
 0.956
GNB5
G protein subunit beta 5.
   
 0.954
GNG2
G protein subunit gamma 2.
   
 0.952
GNG7
G protein subunit gamma 7.
    
 0.951
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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