Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADD1Adducin 1. (658 aa)    
Predicted Functional Partners:
ADD3
Adducin 3.
   
  0.999
ENSCAPP00000000905
annotation not available
   
 0.996
ANKRD29
Ankyrin repeat domain 29.
    
  0.965
DMTN
Dematin actin binding protein.
   
 0.906
TMOD1
Tropomodulin 1.
    
 
 0.905
MTPN
Myotrophin.
    
  0.883
CAPZB
Capping actin protein of muscle Z-line subunit beta.
     
 0.850
CAPZA1
Capping actin protein of muscle Z-line subunit alpha 1.
     
 0.850
XYLB
Xylulokinase.
  
 
 0.816
MRI1
Methylthioribose-1-phosphate isomerase 1.
  
 
 0.813
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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