STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DLC1DLC1 Rho GTPase activating protein. (1063 aa)    
Predicted Functional Partners:
RASA1
RAS p21 protein activator 1.
    
 
 0.908
TLN1
Talin 1.
    
 
 0.901
ENSCAPP00000006439
annotation not available
   
 0.830
ENSCAPP00000012909
annotation not available
   
 0.830
RND1
Rho family GTPase 1.
   
 0.790
ENSCAPP00000006795
annotation not available
   
 0.790
WWC1
WW and C2 domain containing 1.
   
   0.789
ENSCAPP00000000747
annotation not available
      
 0.748
ENSCAPP00000015329
annotation not available
      
 0.747
ENSCAPP00000017843
annotation not available
   
 0.736
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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