Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001138annotation not available (154 aa)    
Predicted Functional Partners:
DHDDS
Dehydrodolichyl diphosphate synthase subunit.
   
 0.999
TMEM183A
Transmembrane protein 183A.
      
 0.940
PDSS1
Decaprenyl diphosphate synthase subunit 1.
  
 
 0.937
PDSS2
Decaprenyl diphosphate synthase subunit 2.
  
 
 0.929
GGPS1
Geranylgeranyl diphosphate synthase 1.
  
 
 0.929
FNTA
Farnesyltransferase, CAAX box, alpha.
     
 0.928
FDPS
Farnesyl diphosphate synthase.
  
 
 0.927
ENSCAPP00000017159
annotation not available
     
 0.927
FDFT1
Farnesyl-diphosphate farnesyltransferase 1.
     
 0.922
DOLPP1
Dolichyldiphosphatase 1.
    
 0.912
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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