STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001141annotation not available (372 aa)    
Predicted Functional Partners:
MLH1
mutL homolog 1.
  
 
0.999
MSH2
mutS homolog 2.
 
 0.998
MSH6
mutS homolog 6.
  
 0.997
MSH4
mutS homolog 4.
 
 0.991
POLD1
DNA polymerase delta 1, catalytic subunit.
   
 0.981
ENSCAPP00000016576
annotation not available
 
 0.981
ENSCAPP00000007061
annotation not available
  
0.977
EXO1
Exonuclease 1.
   
 0.977
FAN1
FANCD2 and FANCI associated nuclease 1.
    
 0.974
ENSCAPP00000018587
annotation not available
  
 0.974
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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