STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001143annotation not available (105 aa)    
Predicted Functional Partners:
ENSCAPP00000005468
annotation not available
 
     0.943
PLLP
Plasmolipin.
      
 0.647
PTGFR
Prostaglandin F receptor.
    
   0.609
XPR1
Xenotropic and polytropic retrovirus receptor 1.
      
 0.551
RMC1
Regulator of MON1-CCZ1.
      
 0.527
SLC34A3
Solute carrier family 34 member 3.
      
 0.521
SLC20A1
Solute carrier family 20 member 1.
   
   0.474
SLC1A7
Solute carrier family 1 member 7.
  
  
 0.458
GAA
Glucosidase alpha, acid.
     
 0.456
ENSCAPP00000015799
annotation not available
     
 0.456
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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