STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC16A9Solute carrier family 16 member 9. (460 aa)    
Predicted Functional Partners:
SLC22A12
Solute carrier family 22 member 12.
    
 
 0.690
LACTB2
Lactamase beta 2.
      
 0.672
PHF2
PHD finger protein 2.
      
 0.666
RBBP6
RB binding protein 6, ubiquitin ligase.
      
 0.663
ENSCAPP00000005276
annotation not available
      
 0.662
EMB
Embigin.
    
 0.610
GRAP2
GRB2 related adaptor protein 2.
      
 0.609
UBE2H
Ubiquitin conjugating enzyme E2 H.
    
 
 0.604
BSG
Basigin (Ok blood group).
    
 0.599
SLC37A1
Solute carrier family 37 member 1.
      
 0.583
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.