Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PIGSPhosphatidylinositol glycan anchor biosynthesis class S. (381 aa)    
Predicted Functional Partners:
PIGT
Phosphatidylinositol glycan anchor biosynthesis class T.
   
 0.999
GPAA1
Glycosylphosphatidylinositol anchor attachment 1.
   
 0.999
PIGK
Phosphatidylinositol glycan anchor biosynthesis class K.
   
 0.999
CAPNS1
Calpain small subunit 1.
     
  0.991
ENSCAPP00000003188
annotation not available
   
 0.990
PGAP1
post-GPI attachment to proteins inositol deacylase 1.
    
 0.950
PIGF
Phosphatidylinositol glycan anchor biosynthesis class F.
     
 0.927
CASP9
Caspase 9.
     
  0.913
ENSCAPP00000014760
annotation not available
    
  0.845
ENSCAPP00000006197
annotation not available
    
   0.810
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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