Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFNB1Ephrin B1. (293 aa)    
Predicted Functional Partners:
EPHB3
EPH receptor B3.
   
 0.998
EPHB4
EPH receptor B4.
   
 0.997
EPHB1
EPH receptor B1.
   
 0.992
EPHB2
EPH receptor B2.
   
 0.991
NCK2
NCK adaptor protein 2.
    
 0.988
EFNB2
Ephrin B2.
   
 0.988
EPHB6
EPH receptor B6.
   
 0.971
EPHA1
EPH receptor A1.
   
 0.948
EFNA4
Ephrin A4.
     
 0.914
EFNB3
Ephrin B3.
     
 0.912
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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