STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IPO13Importin 13. (856 aa)    
Predicted Functional Partners:
RBM8A
RNA binding motif protein 8A.
    
 0.990
GART
annotation not available
   
 0.983
MAGOHB
Mago homolog B, exon junction complex subunit.
    
 0.893
MAGOH
Mago homolog, exon junction complex subunit.
    
 0.893
ENSCAPP00000013809
annotation not available
    
 
 0.734
ENSCAPP00000013872
annotation not available
    
 
 0.734
ADGRB1
Adhesion G protein-coupled receptor B1.
    
 0.708
ENSCAPP00000016784
annotation not available
    
 0.708
ADGRB2
Adhesion G protein-coupled receptor B2.
    
 0.708
ENSCAPP00000001340
annotation not available
    
 
 0.671
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.