STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FCN1Ficolin 1. (319 aa)    
Predicted Functional Partners:
MBL2
Mannose binding lectin 2.
    
 0.949
PLAU
Plasminogen activator, urokinase.
    
 0.921
F7
Coagulation factor VII.
    
 0.912
ENSCAPP00000009206
annotation not available
    
 0.905
ENSCAPP00000009416
annotation not available
    
 0.888
F3
Coagulation factor III, tissue factor.
     
 0.885
C1S
Complement C1s.
    
 0.821
C1R
Complement C1r.
    
 0.805
PLAT
Plasminogen activator, tissue type.
    
 0.785
COLEC10
Collectin subfamily member 10.
    
 0.710
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.