STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001168annotation not available (581 aa)    
Predicted Functional Partners:
TP53
Tumor protein p53.
    
 0.869
BARD1
BRCA1 associated RING domain 1.
    
 0.857
KDM2B
Lysine demethylase 2B.
    
 0.853
KDM2A
Lysine demethylase 2A.
    
 0.853
ENSCAPP00000013591
annotation not available
    
 0.853
FBXL19
F-box and leucine rich repeat protein 19.
    
 0.853
RB1
RB transcriptional corepressor 1.
    
 0.832
KDM6B
Lysine demethylase 6B.
    
 0.806
CBX4
Chromobox 4.
    
 0.747
ENSCAPP00000001550
annotation not available
    
 0.738
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.