Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CMC1C-X9-C motif containing 1. (99 aa)    
Predicted Functional Partners:
SURF1
SURF1 cytochrome c oxidase assembly factor.
   
 
 0.931
AZI2
5-azacytidine induced 2.
      
 0.830
ENSCAPP00000009147
annotation not available
    
   0.809
PUM2
Pumilio RNA binding family member 2.
    
   0.809
ENSCAPP00000008186
annotation not available
    
  0.698
CHCHD4
Coiled-coil-helix-coiled-coil-helix domain containing 4.
   
 
 0.697
ENSCAPP00000000351
annotation not available
   
 0.685
ENSCAPP00000017563
annotation not available
      
 0.659
ENSCAPP00000012999
annotation not available
    
 0.648
ATP23
ATP23 metallopeptidase and ATP synthase assembly factor homolog.
   
  
 0.635
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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