STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPEARThrombospondin type laminin G domain and EAR repeats. (649 aa)    
Predicted Functional Partners:
ENSCAPP00000005470
annotation not available
    
 0.925
MYH9
Myosin heavy chain 9.
    
 0.912
STRC
Stereocilin.
    
 0.912
PCDH15
Protocadherin related 15.
     
 0.840
WHRN
Whirlin.
    
 0.752
ENSCAPP00000010888
annotation not available
    
 0.722
USH2A
Usherin.
    
 0.695
CDH23
Cadherin related 23.
     
 0.693
ENSCAPP00000003238
annotation not available
     
 0.681
ENSCAPP00000009206
annotation not available
    
 0.623
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.