SLC25A16 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Experiments

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[Homology]

Score

SLC25A16

Solute carrier family 25 member 16. (289 aa)

Predicted Functional Partners:

RPL14

0.844

RSAD1

0.837

ENSCAPP00000000576

0.816

ENSCAPP00000004781

0.816

RPL4

0.814

RPSA

0.798

RPL6

0.790

ENSCAPP00000004658

0.786

ENSCAPP00000016878

0.774

RPL8

0.770

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000000576	ENSCAPP00000004658	ENSCAPP00000000576	ENSCAPP00000004658	annotation not available	annotation not available	0.998
ENSCAPP00000000576	ENSCAPP00000004781	ENSCAPP00000000576	ENSCAPP00000004781	annotation not available	annotation not available	0.990
ENSCAPP00000000576	ENSCAPP00000016878	ENSCAPP00000000576	ENSCAPP00000016878	annotation not available	annotation not available	0.999
ENSCAPP00000000576	RPL14	ENSCAPP00000000576	ENSCAPP00000006191	annotation not available	Ribosomal protein L14.	0.999
ENSCAPP00000000576	RPL4	ENSCAPP00000000576	ENSCAPP00000013827	annotation not available	Ribosomal protein L4.	0.998
ENSCAPP00000000576	RPL6	ENSCAPP00000000576	ENSCAPP00000014432	annotation not available	Ribosomal protein L6.	0.998
ENSCAPP00000000576	RPL8	ENSCAPP00000000576	ENSCAPP00000003457	annotation not available	Ribosomal protein L8.	0.998
ENSCAPP00000000576	RPSA	ENSCAPP00000000576	ENSCAPP00000015695	annotation not available	Ribosomal protein SA.	0.999
ENSCAPP00000000576	RSAD1	ENSCAPP00000000576	ENSCAPP00000009793	annotation not available	Radical S-adenosyl methionine domain containing 1.	0.999
ENSCAPP00000000576	SLC25A16	ENSCAPP00000000576	ENSCAPP00000001182	annotation not available	Solute carrier family 25 member 16.	0.816
ENSCAPP00000004658	ENSCAPP00000000576	ENSCAPP00000004658	ENSCAPP00000000576	annotation not available	annotation not available	0.998
ENSCAPP00000004658	ENSCAPP00000004781	ENSCAPP00000004658	ENSCAPP00000004781	annotation not available	annotation not available	0.998
ENSCAPP00000004658	ENSCAPP00000016878	ENSCAPP00000004658	ENSCAPP00000016878	annotation not available	annotation not available	0.999
ENSCAPP00000004658	RPL14	ENSCAPP00000004658	ENSCAPP00000006191	annotation not available	Ribosomal protein L14.	0.999
ENSCAPP00000004658	RPL4	ENSCAPP00000004658	ENSCAPP00000013827	annotation not available	Ribosomal protein L4.	0.999
ENSCAPP00000004658	RPL6	ENSCAPP00000004658	ENSCAPP00000014432	annotation not available	Ribosomal protein L6.	0.999
ENSCAPP00000004658	RPL8	ENSCAPP00000004658	ENSCAPP00000003457	annotation not available	Ribosomal protein L8.	0.999
ENSCAPP00000004658	RPSA	ENSCAPP00000004658	ENSCAPP00000015695	annotation not available	Ribosomal protein SA.	0.999
ENSCAPP00000004658	RSAD1	ENSCAPP00000004658	ENSCAPP00000009793	annotation not available	Radical S-adenosyl methionine domain containing 1.	0.995
ENSCAPP00000004658	SLC25A16	ENSCAPP00000004658	ENSCAPP00000001182	annotation not available	Solute carrier family 25 member 16.	0.786