STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC35F1Solute carrier family 35 member F1. (380 aa)    
Predicted Functional Partners:
DHDDS
Dehydrodolichyl diphosphate synthase subunit.
    
 0.697
GGPS1
Geranylgeranyl diphosphate synthase 1.
    
  0.658
PDSS2
Decaprenyl diphosphate synthase subunit 2.
    
  0.624
PDSS1
Decaprenyl diphosphate synthase subunit 1.
    
  0.624
CLDN17
Claudin 17.
   
  
 0.585
SDK2
Sidekick cell adhesion molecule 2.
      
 0.567
BICC1
BicC family RNA binding protein 1.
      
 0.567
ZNF516
Zinc finger protein 516.
      
 0.555
ABCA12
ATP binding cassette subfamily A member 12.
  
  
 0.550
FREM3
FRAS1 related extracellular matrix 3.
      
 0.545
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.