Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC35F1Solute carrier family 35 member F1. (380 aa)    
Predicted Functional Partners:
CLDN17
Claudin 17.
   
  
 0.884
BICC1
BicC family RNA binding protein 1.
      
 0.881
SDK2
Sidekick cell adhesion molecule 2.
      
 0.880
ZNF516
Zinc finger protein 516.
      
 0.854
ATP5F1B
ATP synthase F1 subunit beta.
    
   0.837
RETREG3
Reticulophagy regulator family member 3.
    
   0.813
GRIK1
Glutamate ionotropic receptor kainate type subunit 1.
   
  
 0.702
GGPS1
Geranylgeranyl diphosphate synthase 1.
   
  0.692
FREM3
FRAS1 related extracellular matrix 3.
      
 0.692
USP3
Ubiquitin specific peptidase 3.
      
 0.690
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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