STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMD11Sterile alpha motif domain containing 11. (524 aa)    
Predicted Functional Partners:
PGBD5
piggyBac transposable element derived 5.
    
 
 0.628
MIOX
Myo-inositol oxygenase.
      
 0.563
FAM83C
Family with sequence similarity 83 member C.
      
 0.558
ENSCAPP00000012442
annotation not available
      
 0.555
ZNF276
Zinc finger protein 276.
    
 
 0.416
IL7R
Interleukin 7 receptor.
  
 
   0.411
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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