Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SAMD11Sterile alpha motif domain containing 11. (524 aa)    
Predicted Functional Partners:
ENSCAPP00000016119
annotation not available
    
  0.769
ENSCAPP00000002300
annotation not available
    
  0.767
ANAPC2
Anaphase promoting complex subunit 2.
   
 
  0.755
ANAPC5
Anaphase promoting complex subunit 5.
   
 
  0.753
ANAPC15
Anaphase promoting complex subunit 15.
     
  0.751
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
     
  0.751
CDC16
Cell division cycle 16.
     
  0.751
ANAPC10
Anaphase promoting complex subunit 10.
     
  0.751
ANAPC4
Anaphase promoting complex subunit 4.
     
  0.751
CDC27
Cell division cycle 27.
     
  0.750
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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