STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001192annotation not available (156 aa)    
Predicted Functional Partners:
CNIH4
Cornichon family AMPA receptor auxiliary protein 4.
      
 0.584
RNASE13
Ribonuclease A family member 13 (inactive).
      
 0.571
RNH1
Ribonuclease/angiogenin inhibitor 1.
    
   0.571
SDC4
Syndecan 4.
      
 0.459
ENSCAPP00000002622
annotation not available
      
 0.453
ENSCAPP00000008713
annotation not available
   
  
 0.429
EVI2B
Ecotropic viral integration site 2B.
  
     0.418
ENSCAPP00000009742
annotation not available
  
     0.414
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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