STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACTBActin beta. (223 aa)    
Predicted Functional Partners:
PFN2
Profilin 2.
   
 0.977
ACTG2
Actin gamma 2, smooth muscle.
   
  0.959
ENSCAPP00000013678
annotation not available
   
 0.954
MYH9
Myosin heavy chain 9.
   
 0.950
ARPC2
Actin related protein 2/3 complex subunit 2.
   
 0.949
CFL2
Cofilin 2.
   
 0.946
ACTL6A
Actin like 6A.
    
 0.946
SMARCA4
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4.
    
 0.942
ENSCAPP00000001703
annotation not available
   
 0.940
ARPC5
Actin related protein 2/3 complex subunit 5.
   
 0.940
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.