STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATXN10Ataxin 10. (463 aa)    
Predicted Functional Partners:
C8orf37
Chromosome 8 open reading frame 37.
      
 0.578
TNNI1
Troponin I1, slow skeletal type.
      
 0.570
TNNI3
Troponin I3, cardiac type.
      
 0.566
SPTBN2
Spectrin beta, non-erythrocytic 2.
      
 0.552
TGM6
Transglutaminase 6.
      
 0.548
SLC18A2
Solute carrier family 18 member A2.
      
 0.546
ENSCAPP00000012933
annotation not available
      
 0.543
GLRA4
Glycine receptor alpha 4.
      
 0.527
CDPF1
Cysteine rich DPF motif domain containing 1.
      
 0.525
ENSCAPP00000007341
annotation not available
    
 
 0.523
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.