STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCNA5Potassium voltage-gated channel subfamily A member 5. (558 aa)    
Predicted Functional Partners:
KCNAB2
Potassium voltage-gated channel subfamily A regulatory beta subunit 2.
   
 0.933
ENSCAPP00000000576
annotation not available
   
  0.930
ENSCAPP00000004781
annotation not available
   
  0.930
KCNAB1
Potassium voltage-gated channel subfamily A member regulatory beta subunit 1.
   
 0.866
ENSCAPP00000018502
annotation not available
   
 0.838
RPL30
Ribosomal protein L30.
   
 0.830
RPL31
Ribosomal protein L31.
   
 0.830
RPL35
Ribosomal protein L35.
  
 0.825
RPL29
Ribosomal protein L29.
   
 0.825
RPL32
Ribosomal protein L32.
  
 0.825
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.