close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CABCOCO1Ciliary associated calcium binding coiled-coil 1. (270 aa)    
Predicted Functional Partners:
H6PD
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
   
 
 0.814
RPA1
Replication protein A1.
    
 0.756
SASS6
SAS-6 centriolar assembly protein.
    
 0.706
STN1
STN1 subunit of CST complex.
    
 0.706
LIN9
Lin-9 DREAM MuvB core complex component.
    
 0.698
ERCC4
ERCC excision repair 4, endonuclease catalytic subunit.
    
 0.687
LIN54
Lin-54 DREAM MuvB core complex component.
    
 0.680
TESMIN
Testis expressed metallothionein like protein.
    
 0.680
TM9SF2
Transmembrane 9 superfamily member 2.
   
    0.673
ENSCAPP00000007180
annotation not available
    
 0.668
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.