STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERCC2ERCC excision repair 2, TFIIH core complex helicase subunit. (725 aa)    
Predicted Functional Partners:
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
   
 0.999
GTF2H3
General transcription factor IIH subunit 3.
    
 0.998
ENSCAPP00000002475
annotation not available
   
 0.998
CCNH
Cyclin H.
    
 0.998
MMS19
MMS19 homolog, cytosolic iron-sulfur assembly component.
    
 0.998
MNAT1
MNAT1 component of CDK activating kinase.
    
 0.998
GTF2H5
General transcription factor IIH subunit 5.
    
 0.996
ENSCAPP00000010526
annotation not available
    
 0.996
GTF2H4
General transcription factor IIH subunit 4.
    
 0.996
CIAO1
Cytosolic iron-sulfur assembly component 1.
    
 0.995
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (16%) [HD]