STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF2IRD1GTF2I repeat domain containing 1. (1023 aa)    
Predicted Functional Partners:
GTF2I
General transcription factor IIi.
     
0.800
RNASE13
Ribonuclease A family member 13 (inactive).
      
 0.555
BAZ1B
Bromodomain adjacent to zinc finger domain 1B.
      
 0.542
NSUN5
NOP2/Sun RNA methyltransferase 5.
      
 0.529
RFC2
Replication factor C subunit 2.
      
 0.519
CLIP2
CAP-Gly domain containing linker protein 2.
      
 0.438
TBL2
Transducin beta like 2.
      
 0.435
PDE6C
Phosphodiesterase 6C.
      
 0.420
CNGA3
Cyclic nucleotide gated channel subunit alpha 3.
      
 0.420
TMEM132E
Transmembrane protein 132E.
      
 0.412
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.