STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001210annotation not available (65 aa)    
Predicted Functional Partners:
PRDX5
Peroxiredoxin 5.
    
 0.928
EIF2B2
Eukaryotic translation initiation factor 2B subunit beta.
     
  0.716
RMC1
Regulator of MON1-CCZ1.
     
  0.714
EIF2B5
Eukaryotic translation initiation factor 2B subunit epsilon.
     
  0.713
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
     
  0.702
EIF2B1
Eukaryotic translation initiation factor 2B subunit alpha.
     
  0.686
CAMK2B
Calcium/calmodulin dependent protein kinase II beta.
    
 0.677
CAMK2A
Calcium/calmodulin dependent protein kinase II alpha.
    
 0.677
ENSCAPP00000009598
annotation not available
    
 0.677
UBA2
Ubiquitin like modifier activating enzyme 2.
   
 0.657
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.