STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001210annotation not available (65 aa)    
Predicted Functional Partners:
PRDX5
Peroxiredoxin 5.
   
 0.946
CAMK2B
Calcium/calmodulin dependent protein kinase II beta.
    
 0.756
CAMK2A
Calcium/calmodulin dependent protein kinase II alpha.
    
 0.756
ENSCAPP00000009598
annotation not available
    
 0.756
UBA2
Ubiquitin like modifier activating enzyme 2.
   
 0.739
UBA1
Ubiquitin like modifier activating enzyme 1.
    
 0.665
APBA2
Amyloid beta precursor protein binding family A member 2.
    
 0.665
UBA6
Ubiquitin like modifier activating enzyme 6.
    
 0.665
ENSCAPP00000010226
annotation not available
    
 0.665
ENSCAPP00000012597
annotation not available
    
 0.665
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.