Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LDAHLipid droplet associated hydrolase. (236 aa)    
Predicted Functional Partners:
EPHX1
Epoxide hydrolase 1.
    
 
 0.881
PPP1R12A
Protein phosphatase 1 regulatory subunit 12A.
    
   0.829
PPP1R12C
Protein phosphatase 1 regulatory subunit 12C.
    
   0.829
ENSCAPP00000010222
annotation not available
    
   0.829
ENSCAPP00000008427
annotation not available
      
 0.689
CEP68
Centrosomal protein 68.
      
 0.566
PPP1R27
Protein phosphatase 1 regulatory subunit 27.
    
   0.523
PPP1R16A
Protein phosphatase 1 regulatory subunit 16A.
    
   0.523
PPP1R16B
Protein phosphatase 1 regulatory subunit 16B.
    
   0.523
MAGI2
Membrane associated guanylate kinase, WW and PDZ domain containing 2.
      
 0.485
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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