STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDAHLipid droplet associated hydrolase. (236 aa)    
Predicted Functional Partners:
CLPX
Caseinolytic mitochondrial matrix peptidase chaperone subunit.
      
 0.578
EPHX1
Epoxide hydrolase 1.
    
 
 0.529
ENSCAPP00000008427
annotation not available
      
 0.439
PPP1R12A
Protein phosphatase 1 regulatory subunit 12A.
    
   0.426
PPP1R12C
Protein phosphatase 1 regulatory subunit 12C.
    
   0.426
ENSCAPP00000010222
annotation not available
    
   0.426
ABHD5
Abhydrolase domain containing 5.
    
 
 0.421
ABHD4
Abhydrolase domain containing 4.
    
 
 0.421
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.