Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ASB17Ankyrin repeat and SOCS box containing 17. (293 aa)    
Predicted Functional Partners:
ASB2
Ankyrin repeat and SOCS box containing 2.
    
 0.869
CCDC126
Coiled-coil domain containing 126.
      
 0.618
ENOX1
ecto-NOX disulfide-thiol exchanger 1.
      
 0.589
ASB5
Ankyrin repeat and SOCS box containing 5.
    
 0.589
DPY19L3
Dpy-19 like C-mannosyltransferase 3.
   
  
 0.567
TGM6
Transglutaminase 6.
      
 0.553
ENSCAPP00000016562
annotation not available
    
 0.549
ENSCAPP00000010496
annotation not available
      
 0.536
GALNTL5
Polypeptide N-acetylgalactosaminyltransferase like 5.
      
 0.531
DPY19L4
Dpy-19 like 4.
   
  
 0.521
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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