Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SERINC3Serine incorporator 3. (452 aa)    
Predicted Functional Partners:
SERINC5
Serine incorporator 5.
    
  0.921
GRXCR1
Glutaredoxin and cysteine rich domain containing 1.
      
 0.804
ELP1
Elongator complex protein 1.
    
   0.762
RHO
Rhodopsin.
      
 0.708
ENSCAPP00000002906
annotation not available
      
 0.665
NXT1
Nuclear transport factor 2 like export factor 1.
      
 0.661
ENSCAPP00000014411
annotation not available
      
 0.661
ENSCAPP00000010518
annotation not available
      
 0.660
AP4S1
Adaptor related protein complex 4 subunit sigma 1.
      
 0.657
DAGLB
Diacylglycerol lipase beta.
      
 0.642
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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