Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001220annotation not available (34 aa)    
Predicted Functional Partners:
XYLB
Xylulokinase.
    
   0.833
AGL
Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase.
    
   0.700
HSD17B12
Hydroxysteroid 17-beta dehydrogenase 12.
    
 0.698
ENSCAPP00000015384
annotation not available
  
   
 0.686
BARD1
BRCA1 associated RING domain 1.
   
 0.685
CCNH
Cyclin H.
    
   0.663
ENSCAPP00000004386
annotation not available
   
   0.630
ENSCAPP00000008647
annotation not available
   
   0.630
OLFML2B
Olfactomedin like 2B.
      
 0.603
MAPK10
Mitogen-activated protein kinase 10.
   
 0.589
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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