Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001225annotation not available (77 aa)    
Predicted Functional Partners:
TSC2
TSC complex subunit 2.
    
 0.973
TSC1
TSC complex subunit 1.
   
 0.969
MTOR
Mechanistic target of rapamycin kinase.
    
 0.952
RPTOR
Regulatory associated protein of MTOR complex 1.
    
 0.935
CRYBA1
Crystallin beta A1.
   
 
 0.915
CRYBB1
Crystallin beta B1.
   
   0.908
BNIP3
BCL2 interacting protein 3.
    
 0.899
ENSCAPP00000011221
annotation not available
    
 0.887
MLST8
MTOR associated protein, LST8 homolog.
    
 0.875
DEPTOR
DEP domain containing MTOR interacting protein.
    
 0.862
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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