STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001227annotation not available (759 aa)    
Predicted Functional Partners:
PAM16
Presequence translocase associated motor 16.
 
   
  0.904
KLHL20
Kelch like family member 20.
    
 
 0.709
ENSCAPP00000001425
annotation not available
    
  0.657
ENSCAPP00000001834
annotation not available
    
  0.657
ENSCAPP00000003682
annotation not available
    
  0.641
KLHL28
Kelch like family member 28.
    
 
 0.628
RNF166
Ring finger protein 166.
      
 0.558
KBTBD8
Kelch repeat and BTB domain containing 8.
    
 
 0.478
AHCY
Adenosylhomocysteinase.
      
 0.418
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.