STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001229annotation not available (334 aa)    
Predicted Functional Partners:
GOT1
Glutamic-oxaloacetic transaminase 1.
   
 0.968
GOT2
Glutamic-oxaloacetic transaminase 2.
   
 0.968
PC
Pyruvate carboxylase.
  
 0.947
CS
Citrate synthase.
  
 0.936
PDHB
Pyruvate dehydrogenase E1 beta subunit.
  
 0.935
BCKDHB
Branched chain keto acid dehydrogenase E1 subunit beta.
  
 0.935
ENSCAPP00000000130
annotation not available
  
 0.933
ME3
Malic enzyme 3.
  
 0.933
PKM
Pyruvate kinase M1/2.
  
 0.927
ENSCAPP00000010045
annotation not available
  
 
 0.924
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.