Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001230annotation not available (279 aa)    
Predicted Functional Partners:
DDX58
DExD/H-box helicase 58.
    
 0.994
ENSCAPP00000014267
annotation not available
    
   0.957
DHX58
DExH-box helicase 58.
    
 0.895
ENSCAPP00000000214
annotation not available
    
 0.876
ENSCAPP00000009782
annotation not available
    
 0.876
ENSCAPP00000011310
annotation not available
    
 0.876
ENSCAPP00000015561
annotation not available
    
 0.876
CTNNAL1
Catenin alpha like 1.
    
   0.822
IFIH1
Interferon induced with helicase C domain 1.
   
 0.787
MAVS
Mitochondrial antiviral signaling protein.
    
 0.780
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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