Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABCA12ATP binding cassette subfamily A member 12. (2442 aa)    
Predicted Functional Partners:
TRIP12
Thyroid hormone receptor interactor 12.
     
 0.845
ENSCAPP00000016884
annotation not available
   
 0.830
ABCA5
ATP binding cassette subfamily A member 5.
    
 
 0.821
ABCD4
ATP binding cassette subfamily D member 4.
     
 0.750
OSBPL6
Oxysterol binding protein like 6.
      
 0.688
CYP4F22
Cytochrome P450 family 4 subfamily F member 22.
    
 
 0.688
SLCO3A1
Solute carrier organic anion transporter family member 3A1.
      
 0.683
NIPAL4
NIPA like domain containing 4.
      
 0.676
ENSCAPP00000005567
annotation not available
   
 
 0.673
ABCC12
ATP binding cassette subfamily C member 12.
   
 0.673
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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