Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF786Zinc finger protein 786. (625 aa)    
Predicted Functional Partners:
ENSCAPP00000018052
annotation not available
    
 
 0.612
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.556
THTPA
Thiamine triphosphatase.
   
 
 0.552
TRIM28
Tripartite motif containing 28.
    
 0.537
GART
annotation not available
     
  0.505
UBAP2L
Ubiquitin associated protein 2 like.
    
 0.485
BARD1
BRCA1 associated RING domain 1.
    
 0.484
ZKSCAN5
Zinc finger with KRAB and SCAN domains 5.
    
 
 0.482
SPOPL
Speckle type BTB/POZ protein like.
   
  0.453
SPOP
Speckle type BTB/POZ protein.
   
  0.453
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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