STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUDCNuclear distribution C, dynein complex regulator. (273 aa)    
Predicted Functional Partners:
RANBP2
RAN binding protein 2.
   
 
 0.980
PAFAH1B1
Platelet activating factor acetylhydrolase 1b regulatory subunit 1.
    
 0.942
DNAJB1
DnaJ heat shock protein family (Hsp40) member B1.
   
   0.931
DYNC1LI1
Dynein cytoplasmic 1 light intermediate chain 1.
    
 0.886
PLK1
Polo like kinase 1.
    
 0.876
ENSCAPP00000005550
annotation not available
     
 0.813
TBC1D31
TBC1 domain family member 31.
    
 0.809
DYNC2LI1
Dynein cytoplasmic 2 light intermediate chain 1.
     
 0.809
INCENP
Inner centromere protein.
     
 0.798
NDEL1
nudE neurodevelopment protein 1 like 1.
     
 0.794
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.