STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRP8LDL receptor related protein 8. (815 aa)    
Predicted Functional Partners:
ENSCAPP00000001307
annotation not available
    
 0.987
DAB1
DAB adaptor protein 1.
    
 0.958
CLU
Clusterin.
    
 0.870
PCSK9
Proprotein convertase subtilisin/kexin type 9.
    
 0.865
LDLRAP1
Low density lipoprotein receptor adaptor protein 1.
    
 0.824
MYLIP
Myosin regulatory light chain interacting protein.
    
 0.815
LRPAP1
LDL receptor related protein associated protein 1.
    
 0.812
ENSCAPP00000011420
annotation not available
    
 0.751
LPL
Lipoprotein lipase.
    
 0.748
AGRN
Agrin.
    
 0.742
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.