Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
JKAMPJNK1/MAPK8 associated membrane protein. (264 aa)    
Predicted Functional Partners:
DUSP10
Dual specificity phosphatase 10.
      
 0.577
AP3S1
Adaptor related protein complex 3 subunit sigma 1.
      
 0.518
ENSCAPP00000013045
annotation not available
      
 0.514
PDE1C
Phosphodiesterase 1C.
      
 0.456
PDE1A
Phosphodiesterase 1A.
      
 0.454
ENSCAPP00000006355
annotation not available
      
 0.454
SNX24
Sorting nexin 24.
      
 0.454
THEMIS2
Thymocyte selection associated family member 2.
      
 0.453
ASCC1
Activating signal cointegrator 1 complex subunit 1.
      
 0.452
MAPKAP1
MAPK associated protein 1.
      
 0.446
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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