ENSCAPP00000001258 protein (Cavia aperea) - STRING interaction network

Nodes:

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Knowledge-based Evidence

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textmining

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co-expression

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gene co-occurrence

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[Homology]

Score

ENSCAPP00000001258

annotation not available (457 aa)

Predicted Functional Partners:

MYSM1

0.556

GART

0.505

TRIM28

0.491

BARD1

0.484

ENSCAPP00000005047

0.476

ENSCAPP00000009082

0.476

RPL26

0.476

SPOPL

0.453

SPOP

0.453

ENSCAPP00000012893

0.448

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BARD1	ENSCAPP00000001258	ENSCAPP00000016499	ENSCAPP00000001258	BRCA1 associated RING domain 1.	annotation not available	0.484
BARD1	MYSM1	ENSCAPP00000016499	ENSCAPP00000004064	BRCA1 associated RING domain 1.	Myb like, SWIRM and MPN domains 1.	0.999
ENSCAPP00000001258	BARD1	ENSCAPP00000001258	ENSCAPP00000016499	annotation not available	BRCA1 associated RING domain 1.	0.484
ENSCAPP00000001258	ENSCAPP00000005047	ENSCAPP00000001258	ENSCAPP00000005047	annotation not available	annotation not available	0.476
ENSCAPP00000001258	ENSCAPP00000009082	ENSCAPP00000001258	ENSCAPP00000009082	annotation not available	annotation not available	0.476
ENSCAPP00000001258	ENSCAPP00000012893	ENSCAPP00000001258	ENSCAPP00000012893	annotation not available	annotation not available	0.448
ENSCAPP00000001258	GART	ENSCAPP00000001258	ENSCAPP00000003834	annotation not available	annotation not available	0.505
ENSCAPP00000001258	MYSM1	ENSCAPP00000001258	ENSCAPP00000004064	annotation not available	Myb like, SWIRM and MPN domains 1.	0.556
ENSCAPP00000001258	RPL26	ENSCAPP00000001258	ENSCAPP00000017656	annotation not available	Ribosomal protein L26.	0.476
ENSCAPP00000001258	SPOP	ENSCAPP00000001258	ENSCAPP00000013028	annotation not available	Speckle type BTB/POZ protein.	0.453
ENSCAPP00000001258	SPOPL	ENSCAPP00000001258	ENSCAPP00000001428	annotation not available	Speckle type BTB/POZ protein like.	0.453
ENSCAPP00000001258	TRIM28	ENSCAPP00000001258	ENSCAPP00000011915	annotation not available	Tripartite motif containing 28.	0.491
ENSCAPP00000005047	ENSCAPP00000001258	ENSCAPP00000005047	ENSCAPP00000001258	annotation not available	annotation not available	0.476
ENSCAPP00000005047	GART	ENSCAPP00000005047	ENSCAPP00000003834	annotation not available	annotation not available	0.456
ENSCAPP00000005047	MYSM1	ENSCAPP00000005047	ENSCAPP00000004064	annotation not available	Myb like, SWIRM and MPN domains 1.	0.411
ENSCAPP00000009082	ENSCAPP00000001258	ENSCAPP00000009082	ENSCAPP00000001258	annotation not available	annotation not available	0.476
ENSCAPP00000009082	GART	ENSCAPP00000009082	ENSCAPP00000003834	annotation not available	annotation not available	0.456
ENSCAPP00000009082	MYSM1	ENSCAPP00000009082	ENSCAPP00000004064	annotation not available	Myb like, SWIRM and MPN domains 1.	0.411
ENSCAPP00000012893	ENSCAPP00000001258	ENSCAPP00000012893	ENSCAPP00000001258	annotation not available	annotation not available	0.448
GART	ENSCAPP00000001258	ENSCAPP00000003834	ENSCAPP00000001258	annotation not available	annotation not available	0.505