Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DSCAMDS cell adhesion molecule. (1999 aa)    
Predicted Functional Partners:
DCC
DCC netrin 1 receptor.
   
 0.951
NTN3
Netrin 3.
   
 0.882
NTN5
Netrin 5.
   
 0.865
NCK1
NCK adaptor protein 1.
    
 0.847
NCK2
NCK adaptor protein 2.
    
 0.846
DSCAML1
DS cell adhesion molecule like 1.
   
  0.740
ENSCAPP00000005736
annotation not available
    
 0.706
SLIT2
Slit guidance ligand 2.
    
 0.705
UNC5B
Unc-5 netrin receptor B.
    
 0.691
AFDN
Afadin, adherens junction formation factor.
    
 0.683
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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