STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RRP7ARibosomal RNA processing 7 homolog A. (261 aa)    
Predicted Functional Partners:
WDR36
WD repeat domain 36.
   
 0.999
KRR1
KRR1 small subunit processome component homolog.
   
 0.999
BMS1
BMS1 ribosome biogenesis factor.
   
 0.999
HEATR1
HEAT repeat containing 1.
   
 0.999
NOL6
Nucleolar protein 6.
   
 0.999
WDR46
WD repeat domain 46.
   
 0.999
TBL3
Transducin beta like 3.
   
 0.999
UTP6
UTP6 small subunit processome component.
   
 0.999
UTP4
UTP4 small subunit processome component.
   
 0.999
ENSCAPP00000018577
annotation not available
   
 0.999
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.