STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REXO1RNA exonuclease 1 homolog. (1014 aa)    
Predicted Functional Partners:
REXO2
RNA exonuclease 2.
  
 0.956
ENSCAPP00000012499
annotation not available
    
 0.893
PCNA
Proliferating cell nuclear antigen.
  
 0.872
MED6
Mediator complex subunit 6.
   
  0.791
EXOSC10
Exosome component 10.
  
 0.766
MED18
Mediator complex subunit 18.
     
 0.745
FBH1
F-box DNA helicase 1.
  
 
 0.710
ENSCAPP00000008160
annotation not available
  
 0.704
HELZ2
Helicase with zinc finger 2.
   
 0.681
ENSCAPP00000008824
annotation not available
   
    0.681
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.