STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGD3FYVE, RhoGEF and PH domain containing 3. (713 aa)    
Predicted Functional Partners:
ENSCAPP00000009712
annotation not available
    
 0.952
ENSCAPP00000013934
annotation not available
    
 0.952
ENSCAPP00000008113
annotation not available
     
  0.934
GNG12
G protein subunit gamma 12.
     
 0.913
FGD1
FYVE, RhoGEF and PH domain containing 1.
     
  0.911
FGD4
FYVE, RhoGEF and PH domain containing 4.
    
 0.800
GNG7
G protein subunit gamma 7.
     
  0.676
ENSCAPP00000008402
annotation not available
      
 0.574
PNN
Pinin, desmosome associated protein.
      
 0.571
TCEA2
Transcription elongation factor A2.
      
 0.567
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.