STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DYSFDysferlin. (2052 aa)    
Predicted Functional Partners:
CAV3
Caveolin 3.
    
 0.843
ENSCAPP00000017001
annotation not available
   
 0.842
ANXA1
Annexin A1.
   
 0.831
TRIM72
Tripartite motif containing 72.
     
 0.806
ANXA6
Annexin A6.
   
 0.609
ENSCAPP00000004994
annotation not available
   
  
 0.571
CAPN3
Calpain 3.
      
 0.567
ANO5
Anoctamin 5.
      
 0.557
SNX6
Sorting nexin 6.
      
 0.551
SIPA1
Signal-induced proliferation-associated 1.
      
 0.549
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.