Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DYSFDysferlin. (2052 aa)    
Predicted Functional Partners:
CAV3
Caveolin 3.
    
 0.920
TRIM72
Tripartite motif containing 72.
     
 0.842
RIPOR2
RHO family interacting cell polarization regulator 2.
    
 
 0.802
ENSCAPP00000017001
annotation not available
   
 0.801
ENSCAPP00000015110
annotation not available
      
 0.754
SNX6
Sorting nexin 6.
      
 0.753
ANO5
Anoctamin 5.
      
 0.747
SIPA1
Signal-induced proliferation-associated 1.
      
 0.745
CAPN3
Calpain 3.
      
 0.741
ANXA1
Annexin A1.
   
 0.735
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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