STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FLI1Fli-1 proto-oncogene, ETS transcription factor. (430 aa)    
Predicted Functional Partners:
ENSCAPP00000000033
annotation not available
    
 0.722
RUNX2
RUNX family transcription factor 2.
    
 0.722
RUNX3
RUNX family transcription factor 3.
    
 0.722
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
    
 0.663
CBFB
Core-binding factor subunit beta.
    
  0.661
SPI1
Spi-1 proto-oncogene.
   
 0.646
SRF
Serum response factor.
    
 0.628
MYB
MYB proto-oncogene, transcription factor.
     
 0.616
GATA1
GATA binding protein 1.
    
 0.611
TPP1
Tripeptidyl peptidase 1.
   
 
 0.604
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.